Emir Karamehmetoglu
03/08/2024, 11:43 AMmy_asset
that materializes something using Dagster maintained S3PickleIOManager (or sometimes filesystem IO manager). I want to do this inside the same codebase that defines the asset. I want to do this without using a dagster asset/op etc., just in a regular function, which will use the output of my_asset
as an asset factory (the factory will return a sequence of assets, and no assets, if my_asset
has not been materialized).
I thought of using build_input_context
and then getting the output from the currently configured IOManager. However, how do I configure build_input_context
for taking in my_asset
as input?
Assume my asset has name my_asset_name
, asset key prefix/my_asset_name
, a dynamic partition.Scout
03/08/2024, 11:43 AMmy_asset
that has been materialized using the S3PickleIOManager or FilesystemIOManager, you would typically use the asset's I/O manager within the Dagster framework. However, if you want to access the materialized data outside of the Dagster asset/op context, you would need to interact with the storage system directly, using the same logic that the I/O manager would use. The documentation does not provide a direct example of using build_input_context
to load an asset outside of the Dagster execution context. The build_input_context
function is typically used for testing custom I/O managers and is not intended for loading assets in production code. If you want to load the output of my_asset
in a regular Python function, you would need to manually replicate the logic that the I/O manager uses to retrieve the data. For example, if my_asset
is using the S3PickleIOManager, you would need to use the boto3
library (or another S3 client) to download the pickled object from the appropriate S3 bucket and key, and then unpickle it. Similarly, for the FilesystemIOManager, you would read the file from the local filesystem and unpickle the object. Here's a conceptual example of how you might do this for S3, based on the logic that an S3PickleIOManager would use: python import boto3 import pickle def load_my_asset_from_s3(bucket_name, object_key): s3_client = boto3.client('s3') response = s3_client.get_object(Bucket=bucket_name, Key=object_key) body = response['Body'].read() data = pickle.loads(body) return data # Usage bucket_name = 'my-s3-bucket' object_key = 'prefix/my_asset_name' my_asset_data = load_my_asset_from_s3(bucket_name, object_key)
For the filesystem: python import pickle def load_my_asset_from_filesystem(file_path): with open(file_path, 'rb') as f: data = pickle.load(f) return data # Usage file_path = '/path/to/prefix/my_asset_name' my_asset_data = load_my_asset_from_filesystem(file_path)
Please note that this approach requires you to know the exact location (bucket and key for S3, file path for the filesystem) where my_asset
is stored. This location is determined by the configuration of the I/O manager that was used when the asset was materialized. If you need to handle dynamic partitions, you would also need to incorporate the logic to determine the correct partition key to use when constructing the object key or file path. Keep in mind that this approach bypasses the Dagster framework and its asset management features, so you would be responsible for handling any errors or inconsistencies that may arise from directly accessing the storage backend.Emir Karamehmetoglu
03/08/2024, 11:46 AMScout
03/08/2024, 11:46 AMbuild_output_context
function is designed to help test the handle_output
method of an IOManager
by constructing an OutputContext
object with specified parameters. It is not intended for loading assets or their outputs outside of the Dagster execution context. However, if you are looking to create an OutputContext
for testing purposes or to simulate the behavior of an IOManager
outside of a Dagster pipeline, you can use build_output_context
to construct an OutputContext
with the necessary parameters that would typically be provided by the Dagster framework during execution. Here is an example of how you might use build_output_context
based on the documentation: python from dagster import build_output_context output_context = build_output_context( step_key="my_step", name="my_output", run_id="example_run_id", asset_key=AssetKey(["prefix", "my_asset_name"]), partition_key="my_partition_key" ) # You can then use this context to test your IOManager's handle_output method my_io_manager = MyIOManager() my_io_manager.handle_output(output_context, obj=my_data)
This example creates an OutputContext
that you can use to test your custom IOManager
. However, it is important to note that this is a testing utility and should not be used as a means to load data in production code. The handle_output
method is meant to save or handle the output of a step, not to load or retrieve data. To load data, you would typically use the load_input
method of an IOManager
within the context of a Dagster pipeline execution. If you need to load data outside of a Dagster pipeline, you should interact with the storage system directly, as described in the previous response.Emir Karamehmetoglu
03/08/2024, 11:48 AMEmir Karamehmetoglu
03/08/2024, 11:48 AMScout
03/08/2024, 11:48 AMOutputContext
for an asset like my_asset
is typically done within the Dagster framework when an asset is being computed and its output is being handled by an IOManager
. The OutputContext
provides the IOManager
with the information it needs to save the output of an asset to the appropriate location. If you want to create an OutputContext
manually, for example, to test your `IOManager`'s handle_output
method, you can use the build_output_context
function provided by Dagster. This function allows you to construct an OutputContext
with specific parameters. Here's an example of how you might create an OutputContext
for `my_asset`: python from dagster import build_output_context, AssetKey # Example parameters for building the output context asset_key = AssetKey(["prefix", "my_asset_name"]) run_id = "example_run_id" # Replace with your actual run ID output_name = "result" # The name of the output, if your asset has named outputs # Build the output context output_context = build_output_context( asset_key=asset_key, run_id=run_id, output_name=output_name, # You can include additional parameters as needed, such as: # - resources # - config # - metadata (if your asset produces metadata) # - etc. ) # Now you can use this context to interact with your IOManager # For example, to see where the values are saved, you might do something like this: io_manager = MyIOManager() # Replace with your actual IOManager handle_output_method = io_manager.handle_output(output_context, value)
Please note that this is a simplified example, and in a real-world scenario, you would need to provide the actual IOManager
that you are using, along with any other necessary parameters that your IOManager
expects. Keep in mind that this approach is primarily for testing purposes. In a production Dagster pipeline, the OutputContext
is automatically constructed and provided to the IOManager
by the Dagster framework during execution. If you are trying to determine where `my_asset`'s values are saved during actual pipeline execution, you should look at the configuration for the IOManager
associated with my_asset
in your pipeline definition. The IOManager
configuration will dictate where and how the asset's outputs are stored.Emir Karamehmetoglu
03/08/2024, 11:51 AMScout
03/08/2024, 11:51 AMOutputContext
is created and managed internally during the execution of an asset. When you define an asset using the @asset
decorator, Dagster takes care of creating the OutputContext
and passing it to the appropriate IOManager
to handle the output of the asset. Here's an example of how you might define a simple asset: python from dagster import asset @asset def my_asset(): # Perform some computation result = compute_something() return result
When my_asset
is executed within a Dagster pipeline, Dagster will automatically create an OutputContext
that includes information such as the asset key, run ID, and any other relevant metadata. This context is then used by the IOManager
to save the output of my_asset
to the configured storage location. You don't need to manually create an OutputContext
when using assets in this way. However, if you want to understand what happens under the hood, here's a conceptual overview of the steps Dagster takes to create an OutputContext
during asset execution: 1. Dagster starts the execution of the pipeline that includes my_asset
. 2. When it's time to execute my_asset
, Dagster prepares the execution context, which includes resources, configuration, and logging. 3. Dagster then invokes my_asset
, passing in the execution context. 4. Once my_asset
computes its result, Dagster creates an OutputContext
that encapsulates information about the output, such as: - The asset key (derived from the name of the asset and any namespace provided by the @asset
decorator). - The run ID of the current pipeline execution. - The output name, which defaults to "result" for a single output asset. - Any additional metadata or configuration that may be associated with the asset. 5. This OutputContext
is then passed to the handle_output
method of the IOManager
configured for my_asset
. The IOManager
uses the context to determine where and how to store the output. The actual creation and management of the OutputContext
are abstracted away from the user, allowing you to focus on defining the computation and business logic of your assets without worrying about the underlying execution details.Emir Karamehmetoglu
03/08/2024, 11:55 AMScout
03/08/2024, 11:55 AMS3PickleIOManager
provided by Dagster with an asset, the location where the asset's output is stored in S3 is determined by the configuration of the S3PickleIOManager
and the asset's key.
Given the following configuration for the `S3PickleIOManager`:
- S3 bucket name: "dagster"
- S3 prefix: "io-manager"
And an asset with the key AssetKey(["prefix", "my_asset"])
and a standard output named "result", the output would be stored at the following S3 path:
<s3://dagster/io-manager/prefix/my_asset>
The S3PickleIOManager
uses the S3 bucket and prefix specified in its configuration, followed by the asset key components, to construct the S3 path where the asset's output will be stored. The final component of the asset key is used as the name of the file, and the preceding components are used as directories under the base S3 prefix.
Please note that the actual S3 key might also include additional identifiers or metadata, such as run ID or timestamps, depending on the implementation details of the S3PickleIOManager
and how it handles versioning or partitioning of assets. However, based on the standard behavior described in the documentation, the path provided above is the expected location for the asset's output in S3. Dagster Docs button I/O managers | Dagster button How to set dynamic prefix to S3PickleIOM... button S3PickleIOManager S3 key formatting button Thank you for your feedback!Emir Karamehmetoglu
03/08/2024, 11:57 AMScout
03/08/2024, 11:57 AMFilesystemIOManager
provided by Dagster with an asset, the location where the asset's output is stored on the filesystem is determined by the configuration of the FilesystemIOManager
and the asset's key. Given the following configuration for the `FilesystemIOManager`: - Base directory: "/my/base/path" (as an example) And an asset with the key AssetKey(["prefix", "my_asset"])
and a standard output named "result", the output would be stored at the following filesystem path: /my/base/path/prefix/my_asset
The FilesystemIOManager
uses the base directory specified in its configuration, followed by the asset key components, to construct the filesystem path where the asset's output will be stored. The final component of the asset key is used as the name of the file or directory, and the preceding components are used as parent directories under the base directory. Please note that the actual filesystem path might also include additional identifiers or metadata, such as run ID or timestamps, depending on the implementation details of the FilesystemIOManager
and how it handles versioning or partitioning of assets. However, based on the standard behavior described in the documentation, the path provided above is the expected location for the asset's output on the filesystem.Emir Karamehmetoglu
03/08/2024, 1:57 PMScout
03/08/2024, 1:57 PMmy_asset
using either the FilesystemIOManager
or s3PickleIOManager
, you can manually invoke the handle_output
and load_input
methods of the respective IOManager
. Below are Python functions that demonstrate how to perform these tests.
First, let's define `my_asset`:
python
def my_asset():
# This asset returns a Python dictionary of str -> str
return {"key1": "value1", "key2": "value2"}
Now, let's write a function to test the `FilesystemIOManager`:
python
from dagster import build_output_context, build_input_context, AssetKey, FilesystemIOManager
import os
import pickle
def test_filesystem_io_manager(asset_key, base_dir, value):
# Create an instance of the FilesystemIOManager
io_manager = FilesystemIOManager(base_dir=base_dir)
# Build the output context for 'my_asset'
output_context = build_output_context(
asset_key=asset_key,
run_id="test_run_id"
)
# Use the handle_output method to store the value
io_manager.handle_output(output_context, value)
# Build the input context for the downstream asset
input_context = build_input_context(
upstream_output=output_context,
resource_config={"base_dir": base_dir}
)
# Use the load_input method to retrieve the value
retrieved_value = io_manager.load_input(input_context)
return retrieved_value
# Usage
asset_key = AssetKey(["prefix", "my_asset"])
base_dir = "/path/to/storage"
value = my_asset() # The output of my_asset
retrieved_value = test_filesystem_io_manager(asset_key, base_dir, value)
assert retrieved_value == value
Next, let's write a function to test the `s3PickleIOManager`:
```python
from dagster_aws.s3 import S3PickleIOManager
from dagster import build_output_context, build_input_context, AssetKey
import boto3
import pickle
def test_s3_pickle_io_manager(asset_key, bucket, s3_prefix, value):
# Create an instance of the S3PickleIOManager
s3_resource = boto3.resource('s3')
io_manager = S3PickleIOManager(s3_resource=s3_resource, s3_bucket=bucket, s3_prefix=s3_prefix)
# Build the output context for 'my_asset'
output_context = build_output_context(
asset_key=asset_key,
run_id="test_run_id"
)
# Use the handle_output method to store the value
io_manager.handle_output(output_context, value)
# Build the input context for the downstream asset
input_context = build_input_context(
upstream_output=output_context,
resource_config={"s3_bucket": bucket, "s3_prefix": s3_prefix}
)
# Use the load_input method to retrieve the value
retrieved_value = io_manager.load_input(input_context)
return retrieved_value
# Usage
assetScout
03/08/2024, 1:58 PMtest_s3_pickle_io_manager
function also assumes that the boto3
library is installed and properly configured to interact with AWS S3. These functions manually invoke the handle_output
method to store the output of my_asset
and then use the load_input
method to retrieve it, simulating the behavior of a downstream asset consuming the output. The retrieved value is then compared with the original value to ensure correctness.Emir Karamehmetoglu
03/08/2024, 2:01 PMScout
03/08/2024, 2:02 PMhandle_output
and handle_input
methods for any Dagster-maintained IOManager
, we can define a function that accepts an IOManager
instance, the asset key, and any necessary configuration for the IOManager
. This function will specifically test the dictionary returned by my_asset
. Here's a generic function that does this: python from dagster import build_output_context, build_input_context, AssetKey, IOManager def test_io_manager(io_manager: IOManager, asset_key: AssetKey, io_manager_config: dict, value: dict): # Build the output context for 'my_asset' output_context = build_output_context( asset_key=asset_key, run_id="test_run_id", resource_config=io_manager_config ) # Use the handle_output method to store the value io_manager.handle_output(output_context, value) # Build the input context for the downstream asset input_context = build_input_context( upstream_output=output_context, resource_config=io_manager_config ) # Use the load_input method to retrieve the value retrieved_value = io_manager.load_input(input_context) return retrieved_value # Usage example for FilesystemIOManager from dagster import FilesystemIOManager asset_key = AssetKey(["prefix", "my_asset"]) base_dir = "/path/to/storage" value = {"key1": "value1", "key2": "value2"} # The output of my_asset filesystem_io_manager = FilesystemIOManager(base_dir=base_dir) filesystem_retrieved_value = test_io_manager(filesystem_io_manager, asset_key, {"base_dir": base_dir}, value) assert filesystem_retrieved_value == value # Usage example for S3PickleIOManager from dagster_aws.s3 import S3PickleIOManager import boto3 bucket = "my-s3-bucket" s3_prefix = "my-s3-prefix" s3_resource = boto3.resource('s3') s3_pickle_io_manager = S3PickleIOManager(s3_resource=s3_resource, s3_bucket=bucket, s3_prefix=s3_prefix) s3_retrieved_value = test_io_manager(s3_pickle_io_manager, asset_key, {"s3_bucket": bucket, "s3_prefix": s3_prefix}, value) assert s3_retrieved_value == value
This function test_io_manager
is generic in terms of the IOManager
used. It takes an IOManager
instance, the asset key, a configuration dictionary specific to the IOManager
, and the value to be tested (which is the dictionary returned by my_asset
). The function then tests the handle_output
and load_input
methods by storing and retrieving the value, respectively. The usage examples show how to use this function with both the FilesystemIOManager
and the S3PickleIOManager
. You would need to replace the base_dir
, bucket
, and s3_prefix
with the actual values for your environment, and ensure that the necessary libraries and AWS credentials are configured for S3 access.Emir Karamehmetoglu
03/08/2024, 2:18 PMScout
03/08/2024, 2:18 PMhandle_output
and load_input
methods, the run_id
is used to uniquely identify a run within Dagster's execution environment. When you are manually invoking these methods for testing purposes, the run_id
serves as a placeholder to mimic the behavior that would occur during an actual pipeline run.
For the FilesystemIOManager
, the run_id
typically does not affect the file path where the output is stored or loaded from, as the file path is usually determined by the asset key and the base directory configured for the IOManager
.
For the S3PickleIOManager
, the run_id
may be used as part of the S3 key to store outputs if the IOManager
is configured to include it. This can be useful for distinguishing between different runs' outputs and for traceability. However, if you are testing the IOManager
outside of a pipeline run and you are not using run_id
in the S3 key construction, then the run_id
would not affect the S3 path.
If you want to use the test_io_manager
function to actually run the asset and load the output as input for another asset, you would typically do this within a Dagster pipeline or job, where the run_id
is automatically managed by the framework. In that case, the run_id
is important for tracking the execution and lineage of assets.
For testing purposes, you can provide any string as the run_id
, but it should be consistent between the handle_output
and load_input
calls to ensure that the output stored by handle_output
is the same output retrieved by load_input
.
Here's a simplified version of the test_io_manager
function without the run_id
parameter, assuming it's not needed for the file path or S3 key construction:
python
def test_io_manager(io_manager: IOManager, asset_key: AssetKey, io_manager_config: dict, value: dict):
# Build the output context for 'my_asset'
output_context = build_output_context(
asset_key=asset_key,
resource_config=io_manager_config
)
# Use the handle_output method to store the value
io_manager.handle_output(output_context, value)
# Build the input context for the downstream asset
input_context = build_input_context(
upstream_output=output_context,
resource_config=io_manager_config
)
# Use the load_input method to retrieve the value
retrieved_value = io_manager.load_input(input_context)
return retrieved_value
When using this function in a real-world scenario, you would replace the placeholder values with the actual configuration for your IOManager
and the actual output of my_asset
. If you are running this as part of a Dagster pipeline, the run_id
would be automatically provided by the Dagster execution environment. in built-in object IO managers, handle l... button When running a solid selection, enable l... button Dagster Docs button How to use materialize_to_memory with de... button Thank you for your feedback!Emir Karamehmetoglu
03/08/2024, 2:45 PMScout
03/08/2024, 2:46 PMOutputContext
requires specifying the partition information that corresponds to the dynamic partition being materialized. Dynamic partitions are typically used when the set of partitions is not known ahead of time and can change from run to run. To build an OutputContext
for an asset with dynamic partitions, you would need to provide the partition_key
that uniquely identifies the partition you are working with. Here's how you can build the OutputContext
for an asset with dynamic partitions: python from dagster import build_output_context, AssetKey # Example function to build output context for a dynamic partition def build_dynamic_output_context(asset_key, partition_key, io_manager_config): output_context = build_output_context( asset_key=asset_key, partition_key=partition_key, resource_config=io_manager_config ) return output_context # Usage asset_key = AssetKey(["prefix", "my_asset"]) partition_key = "dynamic_partition_123" # Replace with the actual dynamic partition key io_manager_config = {} # Replace with the actual IOManager configuration output_context = build_dynamic_output_context(asset_key, partition_key, io_manager_config)
In this example, partition_key
is a string that represents the dynamic partition key for the asset. This key should match the partition that was used when the asset was materialized. The io_manager_config
is a dictionary containing the configuration for the IOManager
that will be used to handle the asset's output. When you use this OutputContext
with an `IOManager`'s handle_output
method, the IOManager
will store the asset's output in a location that is associated with the specified dynamic partition key. Similarly, when you use the OutputContext
with the load_input
method, the IOManager
will retrieve the asset's output from the location corresponding to the dynamic partition key. Please note that the actual implementation of how dynamic partitions are handled can vary depending on the IOManager
you are using and the storage backend (e.g., filesystem, S3, etc.). The IOManager
may use the partition_key
to construct a unique path or key in the storage backend where the asset's output is stored.Emir Karamehmetoglu
03/11/2024, 10:29 AMScout
03/11/2024, 10:29 AMFileSystemIOManager
in Dagster should have both handle_output
and load_input
methods, as these are part of the IOManager
interface that all I/O managers implement. If you are encountering an issue where the FileSystemIOManager
does not have a load_input
method, it's possible that there may be a version mismatch or an unexpected error. Here are a few steps you can take to troubleshoot this issue: 1. Check Dagster Version: Ensure that you are using a version of Dagster where the FileSystemIOManager
is expected to have the load_input
method. You can check the version of Dagster you are using with pip show dagster
. 2. Review Documentation: Consult the Dagster documentation for the version of Dagster you are using to confirm that the FileSystemIOManager
should have the load_input
method. 3. Update Dagster: If you are using an older version of Dagster, consider updating to the latest version, as the issue may have been resolved in a more recent release. 4. Check for Custom IOManager: Verify that you are indeed using the Dagster-maintained FileSystemIOManager
and not a custom IOManager
that may have been mistakenly named similarly. 5. Check Import Statements: Ensure that you are importing the correct FileSystemIOManager
from the Dagster package. 6. Review Error Message: Look closely at the error message you are receiving. It may contain additional information that can help you identify the source of the problem. 7. Check for Overrides: If you are using a subclass of FileSystemIOManager
, ensure that the load_input
method has not been accidentally overridden or removed. 8. Consult Community Resources: If you are still encountering issues, consider reaching out to the Dagster community through forums, GitHub discussions, or the Dagster Slack channel for additional help. If you are following the documentation and using the correct version of Dagster, you should be able to call the load_input
method on the FileSystemIOManager
without any issues. If the problem persists, please provide additional context or error messages, and I can help guide you further based on that information.Emir Karamehmetoglu
03/11/2024, 10:51 AMScout
03/11/2024, 10:51 AMmy_asset
and tests the load_input
method of a configured FileSystemIOManager
, you'll need to follow these steps:
1. Define my_asset
function that returns a dictionary.
2. Configure a FileSystemIOManager
with a specific base directory.
3. Use build_output_context
to create an OutputContext
for my_asset
.
4. Use handle_output
to store the output of my_asset
.
5. Use build_input_context
to create an InputContext
that corresponds to the output of my_asset
.
6. Use load_input
to retrieve the stored output.
7. Assert that the retrieved value matches the original value.
Here's an example of how you might write this test:
python
import os
import pytest
from dagster import build_output_context, build_input_context, AssetKey, FilesystemIOManager
# Define the asset function
def my_asset():
return {"key1": "value1", "key2": "value2"}
# Test function for the FileSystemIOManager
def test_filesystem_io_manager(tmp_path):
# Use pytest's tmp_path fixture to create a temporary directory for the test
base_dir = str(tmp_path)
# Create an instance of the FileSystemIOManager with the temporary directory
io_manager = FilesystemIOManager(base_dir=base_dir)
# Define the asset key
asset_key = AssetKey(["prefix", "my_asset"])
# Build the output context for 'my_asset'
output_context = build_output_context(
asset_key=asset_key,
run_id="test_run_id"
)
# Get the value from my_asset
value = my_asset()
# Use the handle_output method to store the value
io_manager.handle_output(output_context, value)
# Build the input context for the downstream asset
input_context = build_input_context(
upstream_output=output_context
)
# Use the load_input method to retrieve the value
retrieved_value = io_manager.load_input(input_context)
# Assert that the retrieved value matches the original value
assert retrieved_value == value
# Run the test
pytest.main([__file__])
In this test, we're using the tmp_path
fixture provided by pytest, which creates a temporary directory that is unique to the test function and will be cleaned up after the test finishes. This ensures that the test does not have side effects and does not interfere with other tests or the local filesystem.
The test_filesystem_io_manager
function performs the steps outlined above and asserts that the value retrieved by the load_input
method matches the original value returned by my_asset
. If the assertion passes, the test will succeed; otherwise, it will fail, indicating an issue with the `FileSystemIOManager`'s implementation.
To run this test, you can execute the test file using pytest from the command line:
```bashScout
03/11/2024, 10:53 AMmy_test_file.py
with the actual name of your test file.